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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795054.1_cds_XP_016442245.1_3666
CDS Infomation

[gene=LOC107767671] [db_xref=GeneID:107767671] [protein=thiamine biosynthetic bifunctional enzyme TH1, chloroplastic-like isoform X2] [protein_id=XP_016442245.1] [location=complement(join(1563..2085,2804..3048,3942..4069,4202..4266,5901..6035,6447..6522,6596..6671,7739..7813,8768..9040,9299..9319))] [gbkey=CDS]
Sequence

ATGGCGTATTTCTGCACTCAGATTCCAGTGCTGTTGAATCCAGGCGTAGCTTGCATCAAA
AGCTTTCATCAGTATAGGTTTTTGCATATTAAGGCAATGCAAGACGATAAGGTTTCCACG
CCTACGCCGTCGGATGAGTGCATGGTTAGAGTTCCGCATGTTCTGACGGTTGCCGGCTCC
GATTCCGGCGCCGGAGCCGGAATTCAAGCGGATCTCAAGGCTTGTGCTGCTCGGGGAGTT
TATTGCTCCACTGTGATCACTGCTGTTACTGCTCAAAACACCGTAGGGGTTCAGGGCGTG
AACATTGTGCCAGAGGATTTTGTGGCGGAGCAGTTGAGGTCGGTGCTTTCTGATATGCAT
CCCGATGTGGTGAAAACAGGCATGCTTCCGTCAATTGGCATAGTGAAAACTCTCTGTCAG
AGTCTGAAGGAATTCCCGGTACAAGCCTTGGTGGTTGACCCTGTTATGGTATCCACAAGT
GGACATACGTTAGCTGGTCCCTCTATTTTGGATAGTTTTAGGGAGGAGCTTCTTCCCATG
GCTGATATAGTGACCCCAAATTTGAAAGAGGCGTCCGCTTTACTAGGTGGTGTGCCATTG
GAAACAATTGCTGACATGCATTATGCTGCAAAAGCGATACATGACATTGGTCCAAGAAAT
GTACTTGTGAAAGGAGGTGATCTCCCTGCTTCCCTTGATGCTGTGGATGTGTTTTATGAT
GGGAAGGATTTCTATGTGTTTCAGTCTTCACGCATAATGACACCAAATACTCATGGAACT
GGCTGCACTTTGGCTTCTTCTGTCGCAGCTGAGCTAGCAAAGGGTTCTCAAATGCTTTCT
GCTGTTAAGGTAGCTAAACGCTACATTGAAGCAGCCTTGTCTTATAGTAAGAACATTGCC
ATTGGAGGTGGTCGTCAAGGTCCTGTGGATCATCTTTTGAAGCTTAAGAGTAATGTGCAG
CGACGACCTTTTGATCCTTGTGATCTCTTTCTGTATGCTGTCACTGACTCCAGGATGAAC
AAAAGGTGGGGTCGTTCAATAGTTGATGCGGTAAAGGCTGCCATAGAAGGAGGTGCCACC
ATTATTCAGCTGAGGGAAAAGGAGGTTGAAACTAGTGATTTTCTGGAAGCAGCAAAAGCT
TGTTTAAAAATCTGCAGAGTTCATGGTGTTCCTCTGCTGATCAATGACAGGATTGATGTA
GCTCTTGCTAGTGATGCTGATGGTGTTCATATTGGGCAATCCGACATGCCTGCTCATGTT
GCACGGGCTCTTCTTGGGCCTGACAAAATCATTGGTGTATCATGCAAAACACCGGAGCAC
GCCCTGCAAGCATGGATAGATGGGGCTGATTACATTGGCTCTGGGGGTGTATATCCAACC
ACTACCAAAGAGAACAATAAGACGATTGGTTTGGATGGCCTGAAAACTGTTTGTTTGTCA
TCCAAATTACCAGTTGTAGCCATTGGCGGCATAGGCATCTCTAATGCTCAGGCTATAATG
GGACTAGGGGTCCCAAACCTGAAAGGCGTTGCTGTTGTATCTGCTCTATTTGATAGGGAA
TGTGTTTTGACAGAGACCAGAAAGCTACTCGAGGTGCTCAAGGAGTCGACCAAATGA

Peptide Sequence

PEP ID

XP_016442245.1
PEP Infomation

PREDICTED: thiamine biosynthetic bifunctional enzyme TH1, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MAYFCTQIPVLLNPGVACIKSFHQYRFLHIKAMQDDKVSTPTPSDECMVRVPHVLTVAGS
DSGAGAGIQADLKACAARGVYCSTVITAVTAQNTVGVQGVNIVPEDFVAEQLRSVLSDMH
PDVVKTGMLPSIGIVKTLCQSLKEFPVQALVVDPVMVSTSGHTLAGPSILDSFREELLPM
ADIVTPNLKEASALLGGVPLETIADMHYAAKAIHDIGPRNVLVKGGDLPASLDAVDVFYD
GKDFYVFQSSRIMTPNTHGTGCTLASSVAAELAKGSQMLSAVKVAKRYIEAALSYSKNIA
IGGGRQGPVDHLLKLKSNVQRRPFDPCDLFLYAVTDSRMNKRWGRSIVDAVKAAIEGGAT
IIQLREKEVETSDFLEAAKACLKICRVHGVPLLINDRIDVALASDADGVHIGQSDMPAHV
ARALLGPDKIIGVSCKTPEHALQAWIDGADYIGSGGVYPTTTKENNKTIGLDGLKTVCLS
SKLPVVAIGGIGISNAQAIMGLGVPNLKGVAVVSALFDRECVLTETRKLLEVLKESTK

Transcript Sequence

Gene sequence data has not been registered.